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The '''Geoscience Paper of the Future (GPF)''' activity aims to demonstrate how papers will be published in the future, going beyond a PDF format and including software, datasets, and workflow all published in open and accessible ways that make the paper transparent, reproducible, and machine indexable.  We refer to such a paper as a geoscience paper of the future, or GPF for short.
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== Overview ==
  
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==Before you start==
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The GeoSoft '''Geoscience Paper of the Future (GPF)''' activity aims to demonstrate how papers will be published in the future, going beyond a PDF format and including software, datasets, and workflow all published in open and accessible ways that make the paper transparent, reproducible, and machine indexable.  We refer to such a paper as a geoscience paper of the future, or GPF for short.
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'''Learn the basics of how wikis work''':
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* [http://www.organicdatascience.org/framework/index.php/Quick_Guide_to_Using_a_Wiki Quick Guide to Using a Wiki]
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The papers will be submitted to a [http://onlinelibrary.wiley.com/journal/10.1002/%28ISSN%292333-5084/homepage/call_for_papers.htm Special Issue on GeoScience Papers of the Future] of the [http://sites.agu.org AGU] [http://agupubs.onlinelibrary.wiley.com/agu/journal/10.1002/(ISSN)2333-5084/ Earth and Space Sciences] journal.
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* A detailed [//meta.wikimedia.org/wiki/Help:Contents User's Guide].
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'''Some tips''':
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We are extending the GeoSoft GPF activity to the broader community as a [http://www.geosoft-earthcube.org/gpf/ Geoscience Papers of the Future Initiative] to offers training and support to other potential authors of GPFs.
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* You must be logged in before you can edit
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* You can preview your changes before saving, look for the button at the bottom of the edit page
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* Add text or edit only above the line that says
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  <nowiki><!-- Add any wiki Text above this Line -->
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  <!-- Do NOT Edit below this Line --></nowiki>
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* You can see all the prior versions of a page in the "history" tab at the top right of the page
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== Quick Links ==
 
== Quick Links ==
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* [[Plan_overall_timeline | Overall timeline]]
 
 
* [[Hold_regular_telecons#Call_Time_and_Access_Codes | Telecon information]]
 
* [[Hold_regular_telecons#Call_Time_and_Access_Codes | Telecon information]]
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** Next telecon and agenda: [[Hold_regular_telecons#Telecon_Friday_June_19.2C_2015 | Friday June 19]]
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* [http://www.geosoft-earthcube.org/gpf The public GPF site]
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* [[Document_GPF_activities | Task descriptions and training materials]]
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* [[Plan_overall_timeline | Overall timeline]]
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* [[Tips on How to Use Wikis]]
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== Roster of GeoSoft GPF Papers ==
  
 
{| class="wikitable" style="color:black; background-color:#ffffcc;" cellpadding="10"
 
{| class="wikitable" style="color:black; background-color:#ffffcc;" cellpadding="10"
 
|style="width: 10%" |'''Name'''
 
|style="width: 10%" |'''Name'''
 
|style="width: 20%" |'''Affiliation'''
 
|style="width: 20%" |'''Affiliation'''
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|style="width: 20%" |'''Research Area'''
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|style="width: 15%" |'''Research Area'''
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|style="width: 50%" |'''Topic of the paper'''
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|style="width: 40%" |'''Tentative Title'''
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|-
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|style="width: 10%" |'''Submission Category'''
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| Harmony Colella
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| Arizona State University
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| Geophysics and fault mechanics
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| TBD
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|-
 
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| Cedric David
 
| Cedric David
 
| NASA Jet Propulsion Laboratory
 
| NASA Jet Propulsion Laboratory
 
| Hydrology and river modeling
 
| Hydrology and river modeling
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| River Network Routing on the NHDPlus Dataset
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| [[Document_GPF_activities_by_Cedric_David | Going beyond triple-checking, allowing for peace of mind in community model development]]
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| Technical Report
 
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|-
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| Ibrahim Demir
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| Ibrahim Demir et al
 
| University of Iowa
 
| University of Iowa
 
| Hydrology
 
| Hydrology
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| Optimization and evaluation of hydrological network representation techniques for fast access and query in web-based system
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| [[Document_GPF_activities_by_Ibrahim_Demir | Analysis and Optimization of Hydrological Network Database Representation Methods for Fast Access and Query in Web-based System]]
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| Research Article
 
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|-
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| Wally Fulweiler
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| Wally Fulweiler et al
 
| Boston University
 
| Boston University
 
| Coastal marine ecosystems and biogeochemistry
 
| Coastal marine ecosystems and biogeochemistry
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| A long-term data set of direct sediment N2 fluxes in a temperate estuary in Rhode Island
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| [[Document_GPF_activities_by_Wally_Fulweiler | What can we learn from a decade of directly measured sediment di-nitrogen gas fluxes?]]
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| Technical Report
 
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|Leif Karlstrom & Lay Kuan Loh
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| Bakinam T. Essawy, Jon Goodall et al
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| University of Oregon & Carnegie Mellon University
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| University of Virginia
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| Hydrology
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| [[Document_GPF_activities_by_Jon_Goodall | Post-processing Workflows Using Data Grids to Support Hydrologic Modeling]]
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| Research Article
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|-
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|Leif Karlstrom  
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| University of Oregon
 
| Volcanology and fluid mechanics
 
| Volcanology and fluid mechanics
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| Spectral clustering of spatial point clouds for volcanic vents and associated attributes
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| [[Document_GPF_activities_by_Leif_Karlstrom | Characterization of volcanic vent distributions using spectral clustering with eigenvector selection and entropy ranking]]
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| Research Article
 
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|-
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| Kim Miller
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| Kyo Lee et al
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| Columbia University/Lamont Observatory
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| NASA Jet Propulsion Laboratory
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| Earth surface processes
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| Regional climate model evaluation
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| Effects of intermittency on delta dynamics
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| [[Document_GPF_activities_by_Kyo_Lee | Evaluation of simulated temperature, precipitation, cloud fraction and insolation over the conterminous United States using Regional Climate Model Evaluation System]]
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| Research Article
 
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| Heath Mills
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| Heath Mills et al
 
| University of Houston Clear Lake
 
| University of Houston Clear Lake
 
| Marine geomicrobiology
 
| Marine geomicrobiology
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| Molecular Characterization of Water Column Microbial Populations within the Northern Gulf of Mexico Hypoxic Zone
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| [[Document_GPF_activities_by_Heath_Mills | Iron and Sulfur Cycling Biogeography Using Advanced Geochemical and Molecular Analyses]]
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| Research Article
 
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| Suzanne Pierce
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| Ji-Hyun Oh
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| University of Texas Austin
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| USC & NASA JPL
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| Hydrogeology
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| Tropical meteorology
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| Collaborative decision support for water management
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| [[Document_GPF_activities_by_Ji-Hyun_Oh | Tools for computing momentum budget for the westerly wind event associated with the Madden-Julian Oscillation]]
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| Technical Report
 
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| Jordan Read & Luke Winslow
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| Suzanne Pierce et al
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| US Geological Survey
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| Texas Advanced Computing Center, The University of Texas Austin
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| Ecology and physical limnology
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| Hydrogeology, decision support
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| Lake catchment modeling
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| [[Document_GPF_activities_by_Suzanne_Pierce | MCSDSS: An accessible platform and application to enable data fusion and interactive visualization for the geosciences]]
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| Research Article
 
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| Mimi Tzeng
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| Allen Pope
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| NSDIC
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| Glaciology, remote sensing
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| [[Document_GPF_activities_by_Allen_Pope | Reproducibly Estimating and Evaluating Supraglacial Lake Depth with Landsat 8 and other Multispectral Sensors]]
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| Technical Report
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| Mimi Tzeng et al
 
| Dauphin Island Sea Lab
 
| Dauphin Island Sea Lab
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| Marine biology
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| Physical Oceanography
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| Egress of Juvenile Gray Snapper, Lutjanus griseus, from New River, North Carolina
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| [[Document_GPF_activities_by_Mimi_Tzeng | Fisheries Oceanography of Coastal Alabama (FOCAL): A Subset of a Time-Series of Hydrographic and Current Data from a Permanent Moored Station Outside Mobile Bay (27 Jan to 18 May 2011)]]
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| Technical Report
 
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| Sandra Villamizar
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| Sandra Villamizar et al
 
| University of California Merced
 
| University of California Merced
 
| River ecohydrology
 
| River ecohydrology
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| Using whole stream metabolism to assess the response of river ecosystems to flow disturbance events - The case of the San Joaquin River restoration effort.
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| [[Document_GPF_activities_by_Sandra_Villamizar | Producing long-term series of whole-stream metabolism using readily available data]]
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| Technical Report
 
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|-
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| Xuan Yu
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| Xuan Yu et al
 
| University of Delaware
 
| University of Delaware
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| Hydrogeology
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| Hydrology
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| A semidiscrete finite volume formulation for multiprocess watershed simulation
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| [[Document_GPF_activities_by_Xuan_Yu | Learn integrated modeling of coupled surface and subsurface hydrology from scratch]]
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| Technical Report
 
|}
 
|}
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== Acknowledgments ==
 
== Acknowledgments ==
  
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This activity is organized by the [http://www.geosoft-earthcube.org GeoSoft project] as part of the [http://www.earthcube.org] EarthCube initiative of the US National Science Foundation.
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This activity is organized by the [http://www.geosoft-earthcube.org GeoSoft project] as part of the [http://www.earthcube.org EarthCube initiative] of the US National Science Foundation with awards ICER-1343800 and ICER-1440323.

Latest revision as of 02:36, 28 July 2017

Overview

The GeoSoft Geoscience Paper of the Future (GPF) activity aims to demonstrate how papers will be published in the future, going beyond a PDF format and including software, datasets, and workflow all published in open and accessible ways that make the paper transparent, reproducible, and machine indexable. We refer to such a paper as a geoscience paper of the future, or GPF for short.

The papers will be submitted to a Special Issue on GeoScience Papers of the Future of the AGU Earth and Space Sciences journal.

We are extending the GeoSoft GPF activity to the broader community as a Geoscience Papers of the Future Initiative to offers training and support to other potential authors of GPFs.

Quick Links

Roster of GeoSoft GPF Papers

Name Affiliation Research Area Tentative Title Submission Category
Cedric David NASA Jet Propulsion Laboratory Hydrology and river modeling Going beyond triple-checking, allowing for peace of mind in community model development Technical Report
Ibrahim Demir et al University of Iowa Hydrology Analysis and Optimization of Hydrological Network Database Representation Methods for Fast Access and Query in Web-based System Research Article
Wally Fulweiler et al Boston University Coastal marine ecosystems and biogeochemistry What can we learn from a decade of directly measured sediment di-nitrogen gas fluxes? Technical Report
Bakinam T. Essawy, Jon Goodall et al University of Virginia Hydrology Post-processing Workflows Using Data Grids to Support Hydrologic Modeling Research Article
Leif Karlstrom University of Oregon Volcanology and fluid mechanics Characterization of volcanic vent distributions using spectral clustering with eigenvector selection and entropy ranking Research Article
Kyo Lee et al NASA Jet Propulsion Laboratory Regional climate model evaluation Evaluation of simulated temperature, precipitation, cloud fraction and insolation over the conterminous United States using Regional Climate Model Evaluation System Research Article
Heath Mills et al University of Houston Clear Lake Marine geomicrobiology Iron and Sulfur Cycling Biogeography Using Advanced Geochemical and Molecular Analyses Research Article
Ji-Hyun Oh USC & NASA JPL Tropical meteorology Tools for computing momentum budget for the westerly wind event associated with the Madden-Julian Oscillation Technical Report
Suzanne Pierce et al Texas Advanced Computing Center, The University of Texas Austin Hydrogeology, decision support MCSDSS: An accessible platform and application to enable data fusion and interactive visualization for the geosciences Research Article
Allen Pope NSDIC Glaciology, remote sensing Reproducibly Estimating and Evaluating Supraglacial Lake Depth with Landsat 8 and other Multispectral Sensors Technical Report
Mimi Tzeng et al Dauphin Island Sea Lab Physical Oceanography Fisheries Oceanography of Coastal Alabama (FOCAL): A Subset of a Time-Series of Hydrographic and Current Data from a Permanent Moored Station Outside Mobile Bay (27 Jan to 18 May 2011) Technical Report
Sandra Villamizar et al University of California Merced River ecohydrology Producing long-term series of whole-stream metabolism using readily available data Technical Report
Xuan Yu et al University of Delaware Hydrology Learn integrated modeling of coupled surface and subsurface hydrology from scratch Technical Report

Acknowledgments

This activity is organized by the GeoSoft project as part of the EarthCube initiative of the US National Science Foundation with awards ICER-1343800 and ICER-1440323.

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