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TypeM

low

ProgressM

100%

Start dateM

18th Oct 2014

Target dateM

24th Oct 2014

OwnerM

Jordan Read

Participants

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Expertise

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Installing required packages

For windows use use the following command in R: In R, type:

 install.packages("ncdf4",
    repos = "http://gleon.github.com/",
    type = "win.binary") 

then

 install.packages("glmtools", 
    repos = c("http://gleon.github.com/", "http://cran.us.r-project.org", "http://usgs-r.github.com/"),
    dependencies = TRUE,
    type = "both",
    INSTALL_opts = "--no-multiarch") 

For OSX or Linux use the following command in R:

 install.packages("glmtools", 
    repos = c("http://gleon.github.com/", "http://cran.us.r-project.org", "http://usgs-r.github.com/"),
    dependencies = TRUE,
    type = "both")

You now have GLM (GLMr), R tools for GLM (glmtools), NetCDF file handlers (ncdf4), and rLakeAnalyzer installed!!

Run GLM demo

library(glmtools)
sim_folder <- system.file('extdata/sim/', package = 'GLMr')
if (run_glm(sim_folder)==0){cat('congratulations on setting up and running GLM!')}else{cat('setup failed, contact jread@usgs.gov with questions')}

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G16 Age of Water workshop preparation materialsSubTaskRun GLM demo

Credits

Users who have contributed to this Task, its SubTasks and Answers:

• Jordan (16 Edits)
• Hilary (5 Edits)
• Hargreaves (2 Edits)