Difference between revisions of "Run GLM demo"

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===Installing required packages===
 
===Installing required packages===
  
 +
For '''windows''' use use the following command in R:
 
'''Lake Analyzer''' <br />
 
'''Lake Analyzer''' <br />
 
In R, type:  
 
In R, type:  
−
<code><pre> install.packages('rLakeAnalyzer') </pre></code>
+
<code><pre> install.packages("ncdf4",
−
To use package, type:
+
    repos = "http://gleon.github.com/",
−
<code><pre> library(LakeAnalyzer) </pre></code>
+
    type = "win.binary") </pre></code>
−
see [http://cran.r-project.org/web/packages/rLakeAnalyzer/rLakeAnalyzer.pdf Lake Analyzer pdf] for help
+
  
−
'''Lake Metabolizer''' <br />
+
then
−
In R, type:
+
<code><pre> install.packages("glmtools",  
−
<code><pre> install.packages('LakeMetabolizer') </pre></code>
+
    repos = c("http://gleon.github.com/", "http://cran.us.r-project.org", "http://usgs-r.github.com/"),
−
To use package, type:
+
    dependencies = TRUE,
−
<code><pre> library(LakeMetabolizer) </pre></code>
+
    type = "both",
−
see [http://cran.r-project.org/web/packages/LakeMetabolizer/LakeMetabolizer.pdf Lake Metabolizer pdf] for help
+
    INSTALL_opts = "--no-multiarch") </pre></code>
−
 
+
−
To see which packages are currently loaded into your R session, type:
+
−
<code><pre> search() </pre></code>  
+
−
 
+
−
'''GLMtools''' (Not on CRAN) <br />
+
−
instructions from [https://github.com/USGS-R/glmtools USGS github]
+
  
−
''For windows use the following command in R:''
 
−
<code><pre> install.packages("ncdf4",repos = "http://gleon.github.com/",type = "win.binary") </pre></code>
 
−
''then''
 
−
<code><pre> install.packages("glmtools",repos = c("http://gleon.github.com/","http://usgs-r.github.io",
 
−
"http://cran.us.r-project.org"), dependencies = TRUE,type = "both",
 
−
INSTALL_opts = "--no-multiarch") </pre></code>
 
  
−
''For OSX or Linux use the following command in R:''
 
−
<code> <pre>install.packages("glmtools",repos = c('http://gleon.github.com/',"http://usgs-r.github.io",
 
−
'http://cran.us.r-project.org'), dependencies = TRUE,type = "both")</pre></code>
 
  
 
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Revision as of 21:29, 20 October 2014


Installing required packages

For windows use use the following command in R: Lake Analyzer
In R, type: 

 install.packages("ncdf4",
    repos = "http://gleon.github.com/",
    type = "win.binary")

then 

 install.packages("glmtools", 
    repos = c("http://gleon.github.com/", "http://cran.us.r-project.org", "http://usgs-r.github.com/"),
    dependencies = TRUE,
    type = "both",
    INSTALL_opts = "--no-multiarch")



Yandex.Metrica
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