Difference between revisions of "Run GLM demo"
From Age of Water
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| + | ===Installing required packages=== | ||
| + | |||
| + | '''Lake Analyzer''' <br /> | ||
| + | In R, type: | ||
| + | <code><pre> install.packages('rLakeAnalyzer') </pre></code> | ||
| + | To use package, type: | ||
| + | <code><pre> library(LakeAnalyzer) </pre></code> | ||
| + | see [http://cran.r-project.org/web/packages/rLakeAnalyzer/rLakeAnalyzer.pdf Lake Analyzer pdf] for help | ||
| + | |||
| + | '''Lake Metabolizer''' <br /> | ||
| + | In R, type: | ||
| + | <code><pre> install.packages('LakeMetabolizer') </pre></code> | ||
| + | To use package, type: | ||
| + | <code><pre> library(LakeMetabolizer) </pre></code> | ||
| + | see [http://cran.r-project.org/web/packages/LakeMetabolizer/LakeMetabolizer.pdf Lake Metabolizer pdf] for help | ||
| + | |||
| + | To see which packages are currently loaded into your R session, type: | ||
| + | <code><pre> search() </pre></code> | ||
| + | |||
| + | '''GLMtools''' (Not on CRAN) <br /> | ||
| + | instructions from [https://github.com/USGS-R/glmtools USGS github] | ||
| + | |||
| + | ''For windows use the following command in R:'' | ||
| + | <code><pre> install.packages("ncdf4",repos = "http://gleon.github.com/",type = "win.binary") </pre></code> | ||
| + | ''then'' | ||
| + | <code><pre> install.packages("glmtools",repos = c("http://gleon.github.com/","http://usgs-r.github.io", | ||
| + | "http://cran.us.r-project.org"), dependencies = TRUE,type = "both", | ||
| + | INSTALL_opts = "--no-multiarch") </pre></code> | ||
| + | |||
| + | ''For OSX or Linux use the following command in R:'' | ||
| + | <code> <pre>install.packages("glmtools",repos = c('http://gleon.github.com/',"http://usgs-r.github.io", | ||
| + | 'http://cran.us.r-project.org'), dependencies = TRUE,type = "both")</pre></code> | ||
| + | |||
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Revision as of 21:21, 20 October 2014
Installing required packages
Lake Analyzer
In R, type:
install.packages('rLakeAnalyzer') To use package, type:
library(LakeAnalyzer)
see Lake Analyzer pdf for help
Lake Metabolizer
In R, type:
install.packages('LakeMetabolizer') To use package, type:
library(LakeMetabolizer)
see Lake Metabolizer pdf for help
To see which packages are currently loaded into your R session, type:
search()
GLMtools (Not on CRAN)
instructions from USGS github
For windows use the following command in R:
install.packages("ncdf4",repos = "http://gleon.github.com/",type = "win.binary") then
install.packages("glmtools",repos = c("http://gleon.github.com/","http://usgs-r.github.io",
"http://cran.us.r-project.org"), dependencies = TRUE,type = "both",
INSTALL_opts = "--no-multiarch") For OSX or Linux use the following command in R:
install.packages("glmtools",repos = c('http://gleon.github.com/',"http://usgs-r.github.io",
'http://cran.us.r-project.org'), dependencies = TRUE,type = "both")
